9091
:-)

GRAMM

GRAMM is a program for protein docking. To predict the structure of a complex, it requires only the atomic coordinates of the two molecules (no information about the bind...

Submitted: 2007-01-26

8715
:-)

gOpenMol

gOpenMol graphics interface to the OpenMol and can be used for the analysis and display of molecular dynamics trajectories and the display of molecular orbital's, electro...

Submitted: 2007-01-26

8816
:-)

Ghemical

Ghemical is a computational chemistry software package released under the GNU GPL. Geometry optimization, molecular dynamics and some visualization tools are currently av...

Submitted: 2007-01-26

9175
:-)

Garlic

It is a free molecular visualization program, protein structure, DNA structure, PDB, molecular rendering, biological macromolecule, unix, linux, free software download, o...

Submitted: 2007-01-26

8798
:-)

EDPDB

EdPDB is a program to manipulate and extract information from Brookhaven Protein Databank (PDB) format coordinate file(s) of three-dimensional protein structures....        

Submitted: 2007-01-26

9194
:-)

Easy Winbabel

It's a program for chemists and physicists dealing with molecular modeling. It uses the well known BABEL program as basis and provides a windows interface. The zip file i...

Submitted: 2007-01-26

8806
:-)

DomainFinder

It is an interactive program for the determination and characterization of dynamical domains in proteins. Its key features are computational efficiency: even large protei...

Submitted: 2007-01-26

8797
:-)

Dang

Dang reads coordinates from a Protein DataBank (PDB) molecular structure file and generates a table of several useful geometric measurements for each residue or base. In ...

Submitted: 2007-01-26

9333
:-)

Cn3D

Cn3D is a helper application for your web browser that allows you to view 3-dimensional structures from NCBI's Entrez retrieval service....                                  

Submitted: 2007-01-26

9663
:-)

Chem2Pac

Chem2Pac is intended to be a kind of computational chemistry integrator, which has a multiple document interface, a molecular rendering utility, and allows the manipulati...

Submitted: 2007-01-26

32767
:-)

More on Structure Data Format (SDF)

Quick introduction with topic areas below: Details of SDF and other MDL file formats; Sample SDF file; DSSTox SDF files; Encouraging "clean SDF" standards for CRDs; Publi...

Submitted: 2006-03-28

32767
:-)

SD-format

Short but clear explanation of SDF format....                                                                                                                                

Submitted: 2006-03-28

26946
:-)

Sequin

Sequin is a stand-alone software tool developed by the NCBI for submitting and updating entries to the GenBank, EMBL, or DDBJ sequence databases. It is capable of handlin...

Submitted: 2007-01-27