8432
:-)

Circle

Infer RNA secondary structure using the comparative method....                                                                                                              

Submitted: 2007-01-27

8685
:-)

BioEdit

BioEdit is a full integrated sequence/alignment editor. Performs translations, phylogenetic analysis, clustalw alignments, ABI trace analysis, RNA comparative analysis an...

Submitted: 2007-01-27

8782
:-)

Staden

The Staden Package consists of a series of tools for DNA sequence preparation (pregap4), assembly (gap4), editing (gap4) and DNA/protein sequence analysis (spin)....        

Submitted: 2007-01-27

26741
:-)

Sequin

Sequin is a stand-alone software tool developed by the NCBI for submitting and updating entries to the GenBank, EMBL, or DDBJ sequence databases. It is capable of handlin...

Submitted: 2007-01-27

9703
:-)

pDRAW

pDRAW32 is being developed as a free time hobby project. It is far from finished, but as it has reached a point where it could be helpful for many labs, it is now availab...

Submitted: 2007-01-27

9013
:-)

MUMmer

MUMmer is a system for rapidly aligning entire genomes, whether in complete or draft form....                                                                                

Submitted: 2007-01-27

8906
:-)

Glimmer M

A gene finder derived from Glimmer, but developed specifically for eukaryotes. It is based on a dynamic programming algorithm that considers all combinations of possible ...

Submitted: 2007-01-27

10216
:-)

Glimmer HMM

A fast and accurate gene finder based on a GHMM architecture, developed specifically for eukaryotes. It incorporates splice site models adapted from the GeneSplicer progr...

Submitted: 2007-01-27

9832
:-)

Glimmer

A system for finding genes in microbial DNA, especially the genomes of bacteria and archaea.Glimmer (Gene Locator and Interpolated Markov Modeler) uses interpolated Marko...

Submitted: 2007-01-27

9387
:-)

Chromas

It will display and prints chromatogram files from ABI automated DNA sequencers, and Staden SCF files which the analysis programs for ALF, Li-Cor and Visible Genetics Ope...

Submitted: 2007-01-27

32767
:-)

More on Structure Data Format (SDF)

Quick introduction with topic areas below: Details of SDF and other MDL file formats; Sample SDF file; DSSTox SDF files; Encouraging "clean SDF" standards for CRDs; Publi...

Submitted: 2006-03-28

32767
:-)

SD-format

Short but clear explanation of SDF format....                                                                                                                                

Submitted: 2006-03-28

26741
:-)

Sequin

Sequin is a stand-alone software tool developed by the NCBI for submitting and updating entries to the GenBank, EMBL, or DDBJ sequence databases. It is capable of handlin...

Submitted: 2007-01-27