8791
:-)

EDPDB

EdPDB is a program to manipulate and extract information from Brookhaven Protein Databank (PDB) format coordinate file(s) of three-dimensional protein structures....        

Submitted: 2007-01-26

9184
:-)

Easy Winbabel

It's a program for chemists and physicists dealing with molecular modeling. It uses the well known BABEL program as basis and provides a windows interface. The zip file i...

Submitted: 2007-01-26

8806
:-)

DomainFinder

It is an interactive program for the determination and characterization of dynamical domains in proteins. Its key features are computational efficiency: even large protei...

Submitted: 2007-01-26

8795
:-)

Dang

Dang reads coordinates from a Protein DataBank (PDB) molecular structure file and generates a table of several useful geometric measurements for each residue or base. In ...

Submitted: 2007-01-26

9329
:-)

Cn3D

Cn3D is a helper application for your web browser that allows you to view 3-dimensional structures from NCBI's Entrez retrieval service....                                  

Submitted: 2007-01-26

9659
:-)

Chem2Pac

Chem2Pac is intended to be a kind of computational chemistry integrator, which has a multiple document interface, a molecular rendering utility, and allows the manipulati...

Submitted: 2007-01-26

10123
:-)

Biodesigner

It is a molecular modeling and visualization program for personal computers which is capable of creating homologous models of proteins, evaluate, and refine the models....  

Submitted: 2007-01-26

10485
:-)

ArgusLab

It is an incredible molecular modeling, graphics, and drug design program....                                                                                                

Submitted: 2007-01-26

10557
:-)

FTDock

FTDock ( Fourier Transform Dock ) performs rigid-body docking on two biomolecules in order to predict their correct binding geometry. FTDock outputs multiple predictions ...

Submitted: 2007-01-26

7390
:-)

Vigyaan

Vigyaan is an electronic workbench for bioinformatics, computational biology and computational chemistry. It has been designed to meet the needs of both beginners and exp...

Submitted: 2007-01-26

32767
:-)

More on Structure Data Format (SDF)

Quick introduction with topic areas below: Details of SDF and other MDL file formats; Sample SDF file; DSSTox SDF files; Encouraging "clean SDF" standards for CRDs; Publi...

Submitted: 2006-03-28

32767
:-)

SD-format

Short but clear explanation of SDF format....                                                                                                                                

Submitted: 2006-03-28

26940
:-)

Sequin

Sequin is a stand-alone software tool developed by the NCBI for submitting and updating entries to the GenBank, EMBL, or DDBJ sequence databases. It is capable of handlin...

Submitted: 2007-01-27