Open Babel

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Open Babel

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Open Babel is a project designed to pick up where Babel left off, as a cross-platform program and library designed to interconvert between many file formats used in molecular modeling and computational chemistry.

http://openbabel.sourceforge.net/

✍: FYIcenter.com

2007-01-26, 10🔥, 0💬

MOIL
MOIL is a molecular modeling software, which is in the public domain, and is written in the group of Ron Elber. Available features, such as energy calculations, minimization and calculations of classical trajectories. Graphic User Interface for a wide ran 2007-01-26, ≈10🔥, 0💬

Swiss-PdbViewer
Swiss-PdbViewer is an application that provides a user friendly interface allowing to analyze several proteins at the same time. The proteins can be superimposed in order to deduce structural alignments and compare their active sites or any other relevant 2007-01-26, ≈10🔥, 0💬

Swiss-PdbViewer
TraX (Trajectory eXplorer) is a simple Biodesigner-like program working under Linux and Windows. The program allows reading a protein folding simulation trajectory (TRA file) and saving a single frame as a PDB file. 2007-01-26, ≈10🔥, 0💬

MOLMOL
MOLMOL is a molecular graphics program for displaying, analyzing, and manipulating the three-dimensional structure of biological macromolecules, with special emphasis on the study of protein or DNA structures determined by NMR. 2007-01-26, ≈10🔥, 0💬

NOC
It is a free program for protein structure model-building, visualization, validation and analysis. 2007-01-26, ≈10🔥, 0💬

Open Babel
Open Babel is a project designed to pick up where Babel left off, as a cross-platform program and library designed to interconvert between many file formats used in molecular modeling and computational chemistry. 2007-01-26, ≈10🔥, 0💬

Rasmol
Rasmol is a molecular graphics program intended for the visualization of proteins, nucleic acids and small molecules. 2007-01-26, ≈10🔥, 0💬

Reduce
Reduce is a program for adding hydrogens to a Protein Data Bank (PDB) molecular structure file. Hydrogens are added in standardized geometry with optimization of the orientations of OH, SH, NH3+, Met methyls, Asn and Gln sidechain amides, and His rings. B 2007-01-26, ≈10🔥, 0💬

Molscript
A program for displaying molecular 3D structures, such as proteins, in both schematic and detailed representations 2007-01-26, ≈10🔥, 0💬

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