PEAKS

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PEAKS

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PEAKS is an elegant software solution for peptide sequencing and protein identification from tandem mass spectrometry (MS/MS) data. PEAKS is renowned for its ability to provide the sequence of a peptide without the aid of a protein sequence database -- a

http://www.bioinformaticssolutions.com/products/peaks/index.php

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2006-11-09, 8195🔥, 0💬

BioJava Home Page
BioJava is an open-source project dedicated to providing a Java framework for processing biological data. It include objects for manipulating biological sequences, file parsers, DAS client and server support, access to BioSQL and Ensembl databases, tools 2006-11-09, ∼9806🔥, 0💬

ClustalW Submission Form
ClustalW is a general purpose multiple sequence alignment program for DNA or proteins.It produces biologically meaningful multiple sequence alignments of divergent sequences. It calculates the best match for the selected sequences, and lines them up so th 2006-11-09, ∼9643🔥, 0💬

NCBI - Basic Local Alignment Search Tool (BLAST)
The Basic Local Alignment Search Tool (BLAST) finds regions of local similarity between sequences. The program compares nucleotide or protein sequences to sequence databases and calculates the statistical significance of matches. BLAST can be used to infe 2007-01-27, ∼9347🔥, 0💬

BioPerl Home Page
BioPerl is a toolkit of perl modules useful in building bioinformatics solutions in Perl. It is built in an object-oriented manner so that many modules depend on each other to achieve a task. The collection of modules in the bioperl-live repository consis 2006-11-09, ∼9145🔥, 0💬

EMBOSS Home Page
EMBOSS is "The European Molecular Biology Open Software Suite". EMBOSS is a free Open Source software analysis package specially developed for the needs of the molecular biology (e.g. EMBnet) user community. The software automatically copes with data in a 2007-01-27, ∼8399🔥, 0💬

What is COPIA
COnsensus Pattern Identification and Analysis - A software to find motif for protein family classification; Implemented by ChengZhi Liang in 2001 at University of Waterloo 2006-11-09, ∼8373🔥, 0💬

PatternHunter
PatternHunter is a general-purpose homology search tool, based on innovative and proprietary technologies. It provides all the tools necessary for fast and sensitive homology search in all flavors including DNA-DNA, Protein-Protein, translated DNA-protein 2006-11-09, ∼8306🔥, 0💬

PEAKS
PEAKS is an elegant software solution for peptide sequencing and protein identification from tandem mass spectrometry (MS/MS) data. PEAKS is renowned for its ability to provide the sequence of a peptide without the aid of a protein sequence database -- a 2006-11-09, ∼8196🔥, 0💬

Home Page for RasMol and OpenRasMol
RasMol is a program for molecular graphics visualisation originally developed by Roger Sayle. This site is provided for the convenience of users of RasMol and and software developers of open source versions of RasMol. The site itself is provided courtesy 2006-11-09, ∼8142🔥, 0💬

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