Mega3
MEGA is an integrated tool for automatic and manual sequence alignment, inferring phylogenetic trees, mining web-based databases, estimating rates of molecular evolution, and testing evolutionary hypotheses.
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2007-01-27, 9264🔥, 0💬
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PHYLIP
PHYLIP is a free package of programs for inferring phylogenies. 2007-01-27, ∼9439🔥, 0💬
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A profile hidden Markov model that can be used to do sensitive database searching using statistical descriptions of a sequence family's consensus. 2007-01-27, ∼9414🔥, 0💬
Readseq
Reads and writes nucleic/protein sequences in various formats. Data files may have multiple sequences. 2007-01-27, ∼9306🔥, 0💬
JEMBOSS
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JalView
Graphical multiple alignment editor. Requires Java Virtual Machine. 2007-01-27, ∼9240🔥, 0💬