HMMER
A profile hidden Markov model that can be used to do sensitive database searching using statistical descriptions of a sequence family's consensus.
✍: FYIcenter.com
2007-01-27, 9614🔥, 0💬
Related Topics:
FastA
The FastA program has been developed by Pearson & Lipman (1988) and is useful to find all protein sequences of a database such as Swiss-Prot, that are homologous to a given sequence. 2007-01-27, ≈10🔥, 0💬
MFold
Mfold is an RNA and DNA folding package. 2007-01-27, ∼9698🔥, 0💬
FreeTree
Freeware program for construction and bootstrap (and jackknife) analysis of phylogenetic trees from binary data (RAPD, RFLP, AFLP etc.) 2007-01-27, ∼9693🔥, 0💬
GeneDoc
GeneDoc does sequence alignment editing and shading, as well as secondary structure shading and super family group support. 2007-01-27, ∼9647🔥, 0💬
HMMER
A profile hidden Markov model that can be used to do sensitive database searching using statistical descriptions of a sequence family's consensus. 2007-01-27, ∼9615🔥, 0💬
JEMBOSS
Jemboss is developed by the EMBOSS team. The software is free and part of the EMBOSS distribution. 2007-01-27, ∼9505🔥, 0💬
JalView
Graphical multiple alignment editor. Requires Java Virtual Machine. 2007-01-27, ∼9488🔥, 0💬