Osprey

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Application for graphically representing physical and genetic biological interactions; is coupled with the General Repository of Interaction Datasets (The GRID); available for Unix and Windows.

http://biodata.mshri.on.ca/osprey/servlet/Index

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2007-01-27, 9886🔥, 0💬

Artemis
Artemis is a free genome viewer and annotation tool that allows visualization of sequence features and the results of analyses within the context of the sequence, and its six-frame translation. 2007-01-27, ≈10🔥, 0💬

ADVICE
Automated Detection and Validation of Interaction by Co-Evolution (ADVICE) takes a list of protein sequences or sequence pairs as input and uses orthologous sequences to assess the similarity in the evolutionary history of the proteins. It is suggested th 2007-01-27, ≈10🔥, 0💬

Osprey
Application for graphically representing physical and genetic biological interactions; is coupled with the General Repository of Interaction Datasets (The GRID); available for Unix and Windows. 2007-01-27, ∼9887🔥, 0💬

Pajek
Program for Larger Network Analysis. 2007-01-27, ∼9863🔥, 0💬

Graphviz
Graph layout software for protein network. 2007-01-27, ∼9820🔥, 0💬

Teverna
Taverna is a tool for creating and running bioinformatics workflows. 2007-01-27, ∼9734🔥, 0💬

ANTHEPROT
ANTHEPROT (ANalyse THE PROTeins) is to integrate into a single package most of the methods designed for protein sequence analysis. 2007-01-27, ∼9700🔥, 0💬

CNplot
CNplot is a network visualization tool that can be used for large-scale networks, as long as they are pre-clustered. 2007-01-27, ∼9670🔥, 0💬

InterViewer
InterWeaver is a tool employing two approaches to detect potential protein interactions by searching for and interpreting evidence available from on-line databases. The first approach finds homologues for a sequence and searches for interacting partners i 2007-01-27, ∼9668🔥, 0💬

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