InterViewer

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InterWeaver is a tool employing two approaches to detect potential protein interactions by searching for and interpreting evidence available from on-line databases. The first approach finds homologues for a sequence and searches for interacting partners i

http://interviewer.inha.ac.kr/

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2007-01-27, 9584🔥, 0💬

Gepasi
Gepasi is a software package for modeling biochemical systems. It simulates the kinetics of systems of biochemical reactions and provides a number of tools to fit models to data, optimize any function of the model, perform metabolic control analysis and l 2007-01-27, ≈10🔥, 0💬

ADVICE
Automated Detection and Validation of Interaction by Co-Evolution (ADVICE) takes a list of protein sequences or sequence pairs as input and uses orthologous sequences to assess the similarity in the evolutionary history of the proteins. It is suggested th 2007-01-27, ∼9916🔥, 0💬

Osprey
Application for graphically representing physical and genetic biological interactions; is coupled with the General Repository of Interaction Datasets (The GRID); available for Unix and Windows. 2007-01-27, ∼9786🔥, 0💬

Pajek
Program for Larger Network Analysis. 2007-01-27, ∼9776🔥, 0💬

Graphviz
Graph layout software for protein network. 2007-01-27, ∼9734🔥, 0💬

Teverna
Taverna is a tool for creating and running bioinformatics workflows. 2007-01-27, ∼9631🔥, 0💬

CNplot
CNplot is a network visualization tool that can be used for large-scale networks, as long as they are pre-clustered. 2007-01-27, ∼9606🔥, 0💬

ANTHEPROT
ANTHEPROT (ANalyse THE PROTeins) is to integrate into a single package most of the methods designed for protein sequence analysis. 2007-01-27, ∼9598🔥, 0💬

InterViewer
InterWeaver is a tool employing two approaches to detect potential protein interactions by searching for and interpreting evidence available from on-line databases. The first approach finds homologues for a sequence and searches for interacting partners i 2007-01-27, ∼9585🔥, 0💬

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