9465
:-)

Genome Channel

Online Visualization Tools - We provide bioinformatics and analytic services and resources to collaborators, predict prospective gene and protein models for analysis, pro...

Submitted: 2007-02-06

9584
:-)

X3DNA

3DNA is a versatile package for analyzing and rebuilding three-dimensional nucleic acid structures, based on a standard reference frame....                                  

Submitted: 2007-01-27

9379
:-)

Vienna RNA Package

RNA Secondary Structure Prediction and Comparison....                                                                                                                        

Submitted: 2007-01-27

8863
:-)

TreeView

TreeView X is an open source program to display phylogenetic trees. It can read and display NEXUS and Newick format tree files (such as those output by PAUP*, ClustalX, T...

Submitted: 2007-01-27

8923
:-)

Sequence Manipulation Suite

The Sequence Manipulation Suite is a collection of JavaScript programs for generating, formatting, and analyzing short DNA and protein sequences. It is commonly used by m...

Submitted: 2007-01-27

8710
:-)

Readseq

Reads and writes nucleic/protein sequences in various formats. Data files may have multiple sequences....                                                                    

Submitted: 2007-01-27

8906
:-)

RNA DRAW

It is an integrated program for RNA secondary structure calculation and analysis....                                                                                        

Submitted: 2007-01-27

11807
:-)

PhyloDraw

PhyloDraw is a drawing tool for creating phylogenetic trees. It supports various kinds of multialignment programs (Dialign2, Clustal-W, Phylip format, and pairwise distan...

Submitted: 2007-01-27

8824
:-)

PHYLIP

PHYLIP is a free package of programs for inferring phylogenies....                                                                                                          

Submitted: 2007-01-27

8876
:-)

MFold

Mfold is an RNA and DNA folding package....                                                                                                                                  

Submitted: 2007-01-27

32767
:-)

More on Structure Data Format (SDF)

Quick introduction with topic areas below: Details of SDF and other MDL file formats; Sample SDF file; DSSTox SDF files; Encouraging "clean SDF" standards for CRDs; Publi...

Submitted: 2006-03-28

32767
:-)

SD-format

Short but clear explanation of SDF format....                                                                                                                                

Submitted: 2006-03-28

26946
:-)

Sequin

Sequin is a stand-alone software tool developed by the NCBI for submitting and updating entries to the GenBank, EMBL, or DDBJ sequence databases. It is capable of handlin...

Submitted: 2007-01-27